Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 DPM3-202ENST00000368399 517 ntBASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 GHSR-202ENST00000427970 912 ntBASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 TUBB8P8-201ENST00000458717 1058 ntBASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 MIR4683-201ENST00000579659 81 ntBASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 RN7SL163P-201ENST00000583100 276 ntBASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 AC022748.3-201ENST00000621828 275 ntBASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB7Q9Y5E2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 CICP11-201ENST00000434745 2827 ntBASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 AC011742.3-201ENST00000439053 820 ntBASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 MST1L-201ENST00000442552 2185 ntBASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 RN7SL11P-201ENST00000471305 293 ntBASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 AC105250.1-201ENST00000509378 2057 ntBASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 CHMP4BP1-201ENST00000556017 588 ntBASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 RN7SL774P-201ENST00000577467 290 ntBASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 AC097724.1-201ENST00000609581 426 ntBASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 AC091812.3-201ENST00000621362 345 ntBASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 AC004923.1-202ENST00000642106 209 ntBASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB7Q9Y5E2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms