Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.58□□□□□ -0.24
CLCF1Q9UBD9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLCF1Q9UBD9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CLCF1Q9UBD9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLCF1Q9UBD9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLCF1Q9UBD9 CICP11-201ENST00000434745 2827 ntBASIC13.58□□□□□ -0.24
CLCF1Q9UBD9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLCF1Q9UBD9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLCF1Q9UBD9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.58□□□□□ -0.24
CLCF1Q9UBD9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 TPM3P8-201ENST00000330554 643 ntBASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 MIR1908-201ENST00000410394 80 ntBASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 AC009542.2-202ENST00000619004 1067 ntBASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCF1Q9UBD9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 AL513477.1-201ENST00000602865 2407 ntBASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 FAM86MP-201ENST00000340703 885 ntBASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 ACTBP11-201ENST00000436287 1126 ntBASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 AC245100.3-201ENST00000441281 285 ntBASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 DUX4L47-201ENST00000566374 394 ntBASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 AC087481.3-201ENST00000602886 1894 ntBASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 AL360270.3-201ENST00000609118 1348 ntBASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.56□□□□□ -0.24
CLCF1Q9UBD9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms