Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 AC131009.4-201ENST00000624048 1740 ntBASIC18.28■□□□□ 0.52
RTN4Q9NQC3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN4Q9NQC3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 PTCHD3P3-201ENST00000403073 906 ntBASIC18.27■□□□□ 0.52
RTN4Q9NQC3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 FAM210CP-201ENST00000445714 574 ntBASIC18.27■□□□□ 0.52
RTN4Q9NQC3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AC091167.2-201ENST00000579581 588 ntBASIC18.27■□□□□ 0.52
RTN4Q9NQC3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AC004706.3-202ENST00000621574 984 ntBASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AC009950.2-201ENST00000636548 183 ntBASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AF228730.7-201ENST00000641842 219 ntBASIC18.27■□□□□ 0.52
RTN4Q9NQC3 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTN4Q9NQC3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTN4Q9NQC3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.27■□□□□ 0.51
RTN4Q9NQC3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTN4Q9NQC3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RTN4Q9NQC3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTN4Q9NQC3 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RTN4Q9NQC3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RTN4Q9NQC3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTN4Q9NQC3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
RTN4Q9NQC3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 PMS2P1-201ENST00000431037 1228 ntBASIC18.26■□□□□ 0.51
RTN4Q9NQC3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 SLC25A6P2-201ENST00000497974 877 ntBASIC18.26■□□□□ 0.51
RTN4Q9NQC3 AP003716.1-203ENST00000533670 613 ntTSL 3 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 AC139887.3-201ENST00000568585 713 ntBASIC18.26■□□□□ 0.51
RTN4Q9NQC3 AL732292.2-201ENST00000609649 430 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms