Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AP001282.1-201ENST00000531301 1499 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AP001267.2-201ENST00000532619 2086 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 MRPL3P1-201ENST00000400109 1033 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 VN2R19P-201ENST00000442399 1052 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AC009947.1-201ENST00000444350 727 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AL513480.1-201ENST00000451731 511 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 RNA5SP419-201ENST00000515908 135 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 UNC93B6-202ENST00000528242 690 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AP001005.1-201ENST00000571755 1248 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AC021097.1-201ENST00000607902 574 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 ACE3P-201ENST00000423435 1973 ntBASIC13.99□□□□□ -0.17
HMG20AQ9NP66 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMG20AQ9NP66 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 RNU1-129P-201ENST00000384064 167 ntBASIC13.98□□□□□ -0.17
HMG20AQ9NP66 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 HMGA1P7-201ENST00000406908 502 ntBASIC13.98□□□□□ -0.17
HMG20AQ9NP66 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.98□□□□□ -0.17
HMG20AQ9NP66 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms