Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM5Q9C035 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM5Q9C035 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM5Q9C035 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM5Q9C035 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM5Q9C035 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM5Q9C035 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM5Q9C035 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM5Q9C035 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TRIM5Q9C035 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM5Q9C035 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 AL135744.1-201ENST00000565098 629 ntBASIC17.12■□□□□ 0.33
TRIM5Q9C035 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM5Q9C035 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM5Q9C035 REXO1L4P-201ENST00000605109 1937 ntBASIC17.11■□□□□ 0.33
TRIM5Q9C035 CICP17-201ENST00000418553 2377 ntBASIC17.11■□□□□ 0.33
TRIM5Q9C035 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 AC089987.1-201ENST00000551654 2209 ntBASIC17.11■□□□□ 0.33
TRIM5Q9C035 MST1P2-201ENST00000457982 2291 ntBASIC17.11■□□□□ 0.33
TRIM5Q9C035 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 AC079781.3-201ENST00000449110 356 ntBASIC17.11■□□□□ 0.33
TRIM5Q9C035 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 AC064836.3-201ENST00000607928 673 ntBASIC17.11■□□□□ 0.33
TRIM5Q9C035 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM5Q9C035 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms