Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 HLA-V-204ENST00000476601 1289 ntBASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 RN7SL618P-201ENST00000477850 296 ntBASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.8□□□□□ -0.52
SHANK2-AS3Q9BTD1 LILRP1-201ENST00000444199 1370 ntBASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 AC139749.1-202ENST00000617529 3139 ntBASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 SAMD11P1-201ENST00000571429 661 ntBASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 AL671883.3-201ENST00000603274 991 ntBASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.79□□□□□ -0.52
SHANK2-AS3Q9BTD1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms