Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 AC010336.2-201ENST00000564226 506 ntBASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM56Q9BRZ2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 FO538757.1-201ENST00000623083 1397 ntBASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 LINC02084-201ENST00000606069 1096 ntBASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 MIR6069-201ENST00000620069 79 ntBASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 AL109936.8-201ENST00000641772 604 ntBASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM56Q9BRZ2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 AC005912.2-201ENST00000619492 2400 ntBASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms