Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.66■□□□□ 0.1
CDCA3Q99618 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.66■□□□□ 0.1
CDCA3Q99618 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 RPL8P2-201ENST00000430538 502 ntBASIC15.66■□□□□ 0.1
CDCA3Q99618 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDCA3Q99618 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.66■□□□□ 0.1
CDCA3Q99618 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.66■□□□□ 0.1
CDCA3Q99618 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.66■□□□□ 0.1
CDCA3Q99618 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.66■□□□□ 0.1
CDCA3Q99618 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 MIR3677-201ENST00000578964 60 ntBASIC15.66■□□□□ 0.1
CDCA3Q99618 AL109837.1-201ENST00000603272 613 ntBASIC15.66■□□□□ 0.1
CDCA3Q99618 AC005632.3-201ENST00000605544 308 ntBASIC15.66■□□□□ 0.1
CDCA3Q99618 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.66■□□□□ 0.1
CDCA3Q99618 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CDCA3Q99618 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 AD000864.1-201ENST00000624076 2295 ntBASIC15.66■□□□□ 0.1
CDCA3Q99618 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDCA3Q99618 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CDCA3Q99618 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.65■□□□□ 0.1
CDCA3Q99618 AC080080.1-201ENST00000625121 2420 ntBASIC15.65■□□□□ 0.1
CDCA3Q99618 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDCA3Q99618 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 AC136759.1-202ENST00000530858 2194 ntBASIC15.65■□□□□ 0.1
CDCA3Q99618 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.65■□□□□ 0.1
CDCA3Q99618 AL157407.1-201ENST00000435784 904 ntBASIC15.65■□□□□ 0.1
CDCA3Q99618 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.65■□□□□ 0.1
CDCA3Q99618 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 CTBP2P4-201ENST00000513884 920 ntBASIC15.65■□□□□ 0.1
CDCA3Q99618 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.65■□□□□ 0.1
CDCA3Q99618 MIR4649-201ENST00000582839 64 ntBASIC15.65■□□□□ 0.1
CDCA3Q99618 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.65■□□□□ 0.1
CDCA3Q99618 BX088702.1-201ENST00000610784 235 ntBASIC15.65■□□□□ 0.1
CDCA3Q99618 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CDCA3Q99618 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.65■□□□□ 0.1
CDCA3Q99618 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCA3Q99618 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCA3Q99618 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.64■□□□□ 0.1
CDCA3Q99618 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDCA3Q99618 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 CAP2P1-201ENST00000557743 1390 ntBASIC15.64■□□□□ 0.09
CDCA3Q99618 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.64■□□□□ 0.09
CDCA3Q99618 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.64■□□□□ 0.09
CDCA3Q99618 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms