Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.23□□□□□ -0.61
MUC4Q99102 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
MUC4Q99102 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.23□□□□□ -0.61
MUC4Q99102 INGX-202ENST00000489074 768 ntBASIC11.23□□□□□ -0.61
MUC4Q99102 PARP8-206ENST00000503665 572 ntTSL 4 BASIC11.23□□□□□ -0.61
MUC4Q99102 SPDYE22P-201ENST00000582158 798 ntBASIC11.23□□□□□ -0.61
MUC4Q99102 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
MUC4Q99102 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MUC4Q99102 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.23□□□□□ -0.61
MUC4Q99102 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.22□□□□□ -0.61
MUC4Q99102 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
MUC4Q99102 AC100757.3-201ENST00000622361 1406 ntBASIC11.22□□□□□ -0.61
MUC4Q99102 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
MUC4Q99102 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.22□□□□□ -0.61
MUC4Q99102 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.22□□□□□ -0.61
MUC4Q99102 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.22□□□□□ -0.61
MUC4Q99102 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.22□□□□□ -0.61
MUC4Q99102 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.22□□□□□ -0.61
MUC4Q99102 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
MUC4Q99102 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
MUC4Q99102 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.22□□□□□ -0.61
MUC4Q99102 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC11.22□□□□□ -0.61
MUC4Q99102 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.22□□□□□ -0.61
MUC4Q99102 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.22□□□□□ -0.61
MUC4Q99102 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.22□□□□□ -0.61
MUC4Q99102 AL035456.1-201ENST00000456064 1369 ntBASIC11.22□□□□□ -0.61
MUC4Q99102 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.22□□□□□ -0.61
MUC4Q99102 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
MUC4Q99102 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 INTS4P1-203ENST00000641008 3683 ntBASIC11.22□□□□□ -0.61
MUC4Q99102 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
MUC4Q99102 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
MUC4Q99102 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
MUC4Q99102 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MUC4Q99102 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.22□□□□□ -0.61
MUC4Q99102 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
MUC4Q99102 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MUC4Q99102 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
MUC4Q99102 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.21□□□□□ -0.61
MUC4Q99102 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MUC4Q99102 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
MUC4Q99102 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
MUC4Q99102 SPDYE17-201ENST00000412399 783 ntBASIC11.21□□□□□ -0.61
MUC4Q99102 COX5BP8-201ENST00000416911 349 ntBASIC11.21□□□□□ -0.61
MUC4Q99102 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.21□□□□□ -0.61
MUC4Q99102 NME2P1-201ENST00000426182 414 ntBASIC11.21□□□□□ -0.61
MUC4Q99102 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.21□□□□□ -0.61
MUC4Q99102 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.21□□□□□ -0.61
MUC4Q99102 AC097493.3-201ENST00000509725 367 ntBASIC11.21□□□□□ -0.61
MUC4Q99102 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.21□□□□□ -0.61
MUC4Q99102 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.21□□□□□ -0.61
MUC4Q99102 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.21□□□□□ -0.61
MUC4Q99102 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MUC4Q99102 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.21□□□□□ -0.61
MUC4Q99102 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.21□□□□□ -0.61
MUC4Q99102 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MUC4Q99102 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MUC4Q99102 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
MUC4Q99102 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MUC4Q99102 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MUC4Q99102 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
MUC4Q99102 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms