Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 AC006504.5-208ENST00000588784 2401 ntBASIC11.66□□□□□ -0.54
AP1S3Q96PC3 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 LINC00552-201ENST00000625151 2579 ntBASIC11.66□□□□□ -0.54
AP1S3Q96PC3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 RPS2P1-201ENST00000434010 821 ntBASIC11.66□□□□□ -0.54
AP1S3Q96PC3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 AC108073.2-201ENST00000464002 357 ntBASIC11.66□□□□□ -0.54
AP1S3Q96PC3 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.66□□□□□ -0.54
AP1S3Q96PC3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 MIR4321-201ENST00000592276 80 ntBASIC11.66□□□□□ -0.54
AP1S3Q96PC3 AC008735.5-201ENST00000623544 497 ntBASIC11.66□□□□□ -0.54
AP1S3Q96PC3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
AP1S3Q96PC3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms