Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 KRT8P12-202ENST00000472924 1397 ntBASIC14.76□□□□□ -0.05
VPS33AQ96AX1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 KRT18P32-201ENST00000424695 1287 ntBASIC14.76□□□□□ -0.05
VPS33AQ96AX1 KRT18P64-201ENST00000434946 1219 ntBASIC14.76□□□□□ -0.05
VPS33AQ96AX1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 RN7SL828P-201ENST00000607615 303 ntBASIC14.76□□□□□ -0.05
VPS33AQ96AX1 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 REXO1L4P-201ENST00000605109 1937 ntBASIC14.76□□□□□ -0.05
VPS33AQ96AX1 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AC027601.5-201ENST00000624065 2482 ntBASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AC041040.2-201ENST00000622926 2899 ntBASIC14.75□□□□□ -0.05
VPS33AQ96AX1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 MIR574-201ENST00000385209 96 ntBASIC14.75□□□□□ -0.05
VPS33AQ96AX1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 MTND6P24-201ENST00000440466 518 ntBASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 CEND1P1-201ENST00000451006 455 ntBASIC14.75□□□□□ -0.05
VPS33AQ96AX1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 AP001267.2-201ENST00000532619 2086 ntBASIC14.75□□□□□ -0.05
VPS33AQ96AX1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms