Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCE1Q969G3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCE1Q969G3 AC007191.1-201ENST00000623179 2995 ntBASIC17.31■□□□□ 0.36
SMARCE1Q969G3 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.31■□□□□ 0.36
SMARCE1Q969G3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.31■□□□□ 0.36
SMARCE1Q969G3 AC012508.2-201ENST00000567613 1472 ntBASIC17.31■□□□□ 0.36
SMARCE1Q969G3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 KRT18P43-201ENST00000469825 1281 ntBASIC17.3■□□□□ 0.36
SMARCE1Q969G3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 AC092865.5-201ENST00000545435 363 ntBASIC17.3■□□□□ 0.36
SMARCE1Q969G3 SNHG9-202ENST00000564014 471 ntBASIC17.3■□□□□ 0.36
SMARCE1Q969G3 AC074044.1-201ENST00000609673 707 ntBASIC17.3■□□□□ 0.36
SMARCE1Q969G3 TEX28P1-201ENST00000613479 1221 ntBASIC17.3■□□□□ 0.36
SMARCE1Q969G3 TEX28P2-201ENST00000617764 1221 ntBASIC17.3■□□□□ 0.36
SMARCE1Q969G3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 AL645728.2-202ENST00000641679 227 ntBASIC17.3■□□□□ 0.36
SMARCE1Q969G3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 AL121723.1-201ENST00000445194 1519 ntBASIC17.3■□□□□ 0.36
SMARCE1Q969G3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCE1Q969G3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 REXO1L4P-201ENST00000605109 1937 ntBASIC17.29■□□□□ 0.36
SMARCE1Q969G3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.29■□□□□ 0.36
SMARCE1Q969G3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 TOMM22P5-201ENST00000416399 439 ntBASIC17.29■□□□□ 0.36
SMARCE1Q969G3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 RN7SL618P-201ENST00000477850 296 ntBASIC17.29■□□□□ 0.36
SMARCE1Q969G3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCE1Q969G3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 AC005912.2-201ENST00000619492 2400 ntBASIC17.28■□□□□ 0.36
SMARCE1Q969G3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 HLA-J-203ENST00000494367 1087 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms