Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMARCD2Q92925 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SMARCD2Q92925 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMARCD2Q92925 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMARCD2Q92925 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 MAGEA5-201ENST00000446757 942 ntBASIC15.56■□□□□ 0.08
SMARCD2Q92925 MARK2P5-201ENST00000507649 634 ntBASIC15.56■□□□□ 0.08
SMARCD2Q92925 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 FGFR3P5-201ENST00000564496 886 ntBASIC15.56■□□□□ 0.08
SMARCD2Q92925 AL136295.7-201ENST00000619226 1200 ntBASIC15.56■□□□□ 0.08
SMARCD2Q92925 AC068587.8-201ENST00000641239 219 ntBASIC15.56■□□□□ 0.08
SMARCD2Q92925 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 AC012508.2-201ENST00000567613 1472 ntBASIC15.56■□□□□ 0.08
SMARCD2Q92925 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 SHC1P1-201ENST00000425230 1745 ntBASIC15.56■□□□□ 0.08
SMARCD2Q92925 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 AL118508.1-201ENST00000613502 2345 ntBASIC15.56■□□□□ 0.08
SMARCD2Q92925 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.56■□□□□ 0.08
SMARCD2Q92925 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMARCD2Q92925 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 REXO1L4P-201ENST00000605109 1937 ntBASIC15.55■□□□□ 0.08
SMARCD2Q92925 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 ACTG1P2-201ENST00000415776 1125 ntBASIC15.55■□□□□ 0.08
SMARCD2Q92925 ACTG1P11-201ENST00000425411 1125 ntBASIC15.55■□□□□ 0.08
SMARCD2Q92925 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 DUX4L46-201ENST00000566845 751 ntBASIC15.55■□□□□ 0.08
SMARCD2Q92925 MIR4783-201ENST00000580343 82 ntBASIC15.55■□□□□ 0.08
SMARCD2Q92925 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMARCD2Q92925 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.55■□□□□ 0.08
SMARCD2Q92925 INE2-201ENST00000630399 1874 ntBASIC15.54■□□□□ 0.08
SMARCD2Q92925 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.54■□□□□ 0.08
SMARCD2Q92925 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMARCD2Q92925 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMARCD2Q92925 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMARCD2Q92925 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMARCD2Q92925 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMARCD2Q92925 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.54■□□□□ 0.08
SMARCD2Q92925 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMARCD2Q92925 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMARCD2Q92925 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
SMARCD2Q92925 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.54■□□□□ 0.08
SMARCD2Q92925 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMARCD2Q92925 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMARCD2Q92925 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms