Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.27■□□□□ 0.2
SHC3Q92529 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC3Q92529 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC3Q92529 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC3Q92529 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC3Q92529 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.27■□□□□ 0.2
SHC3Q92529 PIN1P1-201ENST00000412108 996 ntBASIC16.27■□□□□ 0.2
SHC3Q92529 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
SHC3Q92529 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SHC3Q92529 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.27■□□□□ 0.2
SHC3Q92529 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.27■□□□□ 0.2
SHC3Q92529 WASH4P-201ENST00000564273 1246 ntBASIC16.27■□□□□ 0.2
SHC3Q92529 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.27■□□□□ 0.2
SHC3Q92529 AC133539.2-201ENST00000604757 467 ntBASIC16.27■□□□□ 0.2
SHC3Q92529 AC008494.3-201ENST00000606615 944 ntBASIC16.27■□□□□ 0.2
SHC3Q92529 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.27■□□□□ 0.2
SHC3Q92529 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.27■□□□□ 0.2
SHC3Q92529 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SHC3Q92529 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC3Q92529 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHC3Q92529 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SHC3Q92529 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SHC3Q92529 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.27■□□□□ 0.19
SHC3Q92529 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.27■□□□□ 0.19
SHC3Q92529 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SHC3Q92529 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SHC3Q92529 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHC3Q92529 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHC3Q92529 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.27■□□□□ 0.19
SHC3Q92529 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.26■□□□□ 0.19
SHC3Q92529 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SHC3Q92529 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.26■□□□□ 0.19
SHC3Q92529 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SHC3Q92529 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.26■□□□□ 0.19
SHC3Q92529 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.26■□□□□ 0.19
SHC3Q92529 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.26■□□□□ 0.19
SHC3Q92529 AC190387.1-201ENST00000551683 408 ntBASIC16.26■□□□□ 0.19
SHC3Q92529 AC140912.1-201ENST00000577171 1054 ntBASIC16.26■□□□□ 0.19
SHC3Q92529 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SHC3Q92529 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SHC3Q92529 AC140479.7-201ENST00000636301 2332 ntBASIC16.26■□□□□ 0.19
SHC3Q92529 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.26■□□□□ 0.19
SHC3Q92529 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SHC3Q92529 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.26■□□□□ 0.19
SHC3Q92529 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.26■□□□□ 0.19
SHC3Q92529 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.26■□□□□ 0.19
SHC3Q92529 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHC3Q92529 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.25■□□□□ 0.19
SHC3Q92529 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SHC3Q92529 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
SHC3Q92529 FER1L4-210ENST00000615531 5998 ntBASIC16.25■□□□□ 0.19
SHC3Q92529 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SHC3Q92529 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.25■□□□□ 0.19
SHC3Q92529 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.25■□□□□ 0.19
SHC3Q92529 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SHC3Q92529 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SHC3Q92529 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SHC3Q92529 ENPP7P5-201ENST00000541031 1031 ntBASIC16.25■□□□□ 0.19
SHC3Q92529 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.25■□□□□ 0.19
SHC3Q92529 WFDC1-204ENST00000613603 549 ntBASIC16.25■□□□□ 0.19
SHC3Q92529 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SHC3Q92529 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SHC3Q92529 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SHC3Q92529 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms