Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 RNA5SP288-201ENST00000516075 93 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 OR10AA1P-201ENST00000417823 937 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AC017081.1-201ENST00000420063 823 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 Z84721.1-201ENST00000438841 372 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 RPL18AP2-201ENST00000450007 482 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AL355075.5-201ENST00000553568 890 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 LINC00929-202ENST00000556159 1169 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 FAM236C-201ENST00000636267 463 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 TNXA-203ENST00000507684 2038 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 RN7SL477P-201ENST00000488440 286 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 TPI1P2-201ENST00000491343 752 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 OR52P2P-201ENST00000527287 955 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AP005018.2-201ENST00000528464 822 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 CLUHP3-207ENST00000563678 1303 ntBASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 HLA-DOB-206ENST00000438763 1372 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SYNE2Q8WXH0 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms