Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 AC126365.1-201ENST00000578585 1514 ntBASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 TERF1P3-201ENST00000505638 1227 ntBASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 AC012645.4-201ENST00000610691 1061 ntBASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 AC126755.1-201ENST00000525846 6405 ntBASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIMC1Q8NDZ2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 AC007541.1-201ENST00000570282 1469 ntBASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 AC005840.4-201ENST00000541242 2494 ntBASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 RN7SL399P-201ENST00000471648 279 ntBASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 AL132655.2-201ENST00000596276 594 ntBASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 AC009118.2-201ENST00000613275 655 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms