Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 AL121723.1-201ENST00000445194 1519 ntBASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 AC138969.3-201ENST00000546612 1459 ntBASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 AC138932.2-201ENST00000548268 1459 ntBASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 AC126755.4-201ENST00000549796 1459 ntBASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 AC114501.2-201ENST00000439631 535 ntBASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 AC092337.1-201ENST00000568699 1129 ntBASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 AC006538.3-201ENST00000612495 578 ntBASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF439Q8NDP4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AGAP7P-201ENST00000582299 2062 ntBASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AGAP14-201ENST00000624701 2060 ntBASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms