Protein–RNA interactions for Protein: Q8N0V3

RBFA, Putative ribosome-binding factor A, mitochondrial, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFAQ8N0V3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.34■□□□□ 0.05
RBFAQ8N0V3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RBFAQ8N0V3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RBFAQ8N0V3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFAQ8N0V3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFAQ8N0V3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFAQ8N0V3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFAQ8N0V3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RBFAQ8N0V3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RBFAQ8N0V3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.33■□□□□ 0.05
RBFAQ8N0V3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RBFAQ8N0V3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.33■□□□□ 0.05
RBFAQ8N0V3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RBFAQ8N0V3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RBFAQ8N0V3 MROH4P-201ENST00000431302 1578 ntBASIC15.33■□□□□ 0.05
RBFAQ8N0V3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RBFAQ8N0V3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
RBFAQ8N0V3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 AC107373.2-201ENST00000607735 490 ntBASIC15.33■□□□□ 0.04
RBFAQ8N0V3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 MIR6799-201ENST00000620297 69 ntBASIC15.33■□□□□ 0.04
RBFAQ8N0V3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 AC093525.8-201ENST00000624099 1342 ntBASIC15.33■□□□□ 0.04
RBFAQ8N0V3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 DRD5P1-201ENST00000456605 1438 ntBASIC15.33■□□□□ 0.04
RBFAQ8N0V3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RBFAQ8N0V3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 LINC00554-201ENST00000564841 3011 ntBASIC15.32■□□□□ 0.04
RBFAQ8N0V3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 AL355864.2-201ENST00000447420 863 ntBASIC15.32■□□□□ 0.04
RBFAQ8N0V3 KLF2P4-201ENST00000451959 1225 ntBASIC15.32■□□□□ 0.04
RBFAQ8N0V3 AC093433.1-201ENST00000458048 571 ntBASIC15.32■□□□□ 0.04
RBFAQ8N0V3 AC106760.1-201ENST00000508690 800 ntBASIC15.32■□□□□ 0.04
RBFAQ8N0V3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RBFAQ8N0V3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms