Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
C12orf56Q8IXR9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
C12orf56Q8IXR9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.5■□□□□ 0.23
C12orf56Q8IXR9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C12orf56Q8IXR9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 AC099063.4-201ENST00000641099 1602 ntBASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 CR383656.12-201ENST00000549567 513 ntBASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 RN7SL48P-201ENST00000579283 293 ntBASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 LINC02084-201ENST00000606069 1096 ntBASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 IGHV3-72-202ENST00000621503 303 ntBASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C12orf56Q8IXR9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 TLE1P1-201ENST00000422965 589 ntBASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AC132938.2-201ENST00000579188 680 ntBASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AC008735.3-201ENST00000596646 500 ntBASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 AL591163.1-201ENST00000641757 987 ntBASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf56Q8IXR9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms