Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ECM1P1-201ENST00000604092 1279 ntBASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 AC132938.4-201ENST00000623835 848 ntBASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 AL359258.3-201ENST00000622910 2331 ntBASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 TPM3P8-201ENST00000330554 643 ntBASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 YBX1P6-201ENST00000442962 1002 ntBASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCN4BQ8IWT1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 SSR4P1-203ENST00000599569 2260 ntBASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 MIR1202-201ENST00000408529 83 ntBASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 RNA5SP486-201ENST00000515961 83 ntBASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 AC022616.1-201ENST00000518688 554 ntBASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCN4BQ8IWT1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms