Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 RNU1-129P-201ENST00000384064 167 ntBASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 KRT16P4-201ENST00000453883 522 ntBASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 AC012615.1-201ENST00000565797 1299 ntBASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 U1.21-201ENST00000580816 167 ntBASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.92□□□□□ -0.18
CROCCP3Q8IVE0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 AC134407.2-201ENST00000625089 1978 ntBASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 AC018529.2-202ENST00000611482 3087 ntBASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 MIR4515-201ENST00000584082 81 ntBASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 AP002414.4-201ENST00000589764 1148 ntBASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 AL031055.1-201ENST00000606362 631 ntBASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 AL121956.5-201ENST00000625261 221 ntBASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CROCCP3Q8IVE0 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 KRT8P22-201ENST00000562317 1415 ntBASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms