Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 AC026748.1-201ENST00000624349 3251 ntBASIC14.17□□□□□ -0.14
VRK2Q86Y07 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 AC139749.1-202ENST00000617529 3139 ntBASIC14.17□□□□□ -0.14
VRK2Q86Y07 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 AC140479.7-201ENST00000636301 2332 ntBASIC14.17□□□□□ -0.14
VRK2Q86Y07 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 AC004890.2-204ENST00000481968 304 ntBASIC14.17□□□□□ -0.14
VRK2Q86Y07 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 SRD5A3P1-201ENST00000603021 949 ntBASIC14.17□□□□□ -0.14
VRK2Q86Y07 AL391069.4-201ENST00000609583 481 ntBASIC14.17□□□□□ -0.14
VRK2Q86Y07 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 AC018529.2-202ENST00000611482 3087 ntBASIC14.17□□□□□ -0.14
VRK2Q86Y07 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 AC022144.1-201ENST00000602255 1580 ntBASIC14.17□□□□□ -0.14
VRK2Q86Y07 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VRK2Q86Y07 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK2Q86Y07 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 MTHFR-210ENST00000641407 2387 ntBASIC14.16□□□□□ -0.14
VRK2Q86Y07 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 AL390955.2-201ENST00000603032 514 ntBASIC14.16□□□□□ -0.14
VRK2Q86Y07 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 AC005912.2-201ENST00000619492 2400 ntBASIC14.16□□□□□ -0.14
VRK2Q86Y07 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VRK2Q86Y07 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK2Q86Y07 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VRK2Q86Y07 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK2Q86Y07 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms