Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP50Q70EL3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP50Q70EL3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP50Q70EL3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.65■□□□□ 0.42
USP50Q70EL3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.65■□□□□ 0.42
USP50Q70EL3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.65■□□□□ 0.42
USP50Q70EL3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP50Q70EL3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.64■□□□□ 0.42
USP50Q70EL3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP50Q70EL3 AC018629.1-201ENST00000623381 1736 ntBASIC17.64■□□□□ 0.41
USP50Q70EL3 AC003102.2-201ENST00000589195 1469 ntBASIC17.64■□□□□ 0.41
USP50Q70EL3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.64■□□□□ 0.41
USP50Q70EL3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
USP50Q70EL3 AC011676.5-201ENST00000624864 2660 ntBASIC17.64■□□□□ 0.41
USP50Q70EL3 RNA5SP359-201ENST00000364838 113 ntBASIC17.64■□□□□ 0.41
USP50Q70EL3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 LINC00634-202ENST00000505157 222 ntBASIC17.64■□□□□ 0.41
USP50Q70EL3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.64■□□□□ 0.41
USP50Q70EL3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 AL118516.1-201ENST00000564152 670 ntBASIC17.64■□□□□ 0.41
USP50Q70EL3 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.64■□□□□ 0.41
USP50Q70EL3 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.64■□□□□ 0.41
USP50Q70EL3 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.64■□□□□ 0.41
USP50Q70EL3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.64■□□□□ 0.41
USP50Q70EL3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP50Q70EL3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP50Q70EL3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.63■□□□□ 0.41
USP50Q70EL3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.63■□□□□ 0.41
USP50Q70EL3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.63■□□□□ 0.41
USP50Q70EL3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
USP50Q70EL3 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.63■□□□□ 0.41
USP50Q70EL3 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.63■□□□□ 0.41
USP50Q70EL3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP50Q70EL3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.63■□□□□ 0.41
USP50Q70EL3 AC002472.4-201ENST00000641915 272 ntBASIC17.63■□□□□ 0.41
USP50Q70EL3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
USP50Q70EL3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP50Q70EL3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
USP50Q70EL3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP50Q70EL3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.63■□□□□ 0.41
USP50Q70EL3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
USP50Q70EL3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.62■□□□□ 0.41
USP50Q70EL3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.62■□□□□ 0.41
USP50Q70EL3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
USP50Q70EL3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
USP50Q70EL3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.62■□□□□ 0.41
USP50Q70EL3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.62■□□□□ 0.41
USP50Q70EL3 MARK2P16-201ENST00000605714 1723 ntBASIC17.62■□□□□ 0.41
USP50Q70EL3 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.62■□□□□ 0.41
USP50Q70EL3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
USP50Q70EL3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.62■□□□□ 0.41
USP50Q70EL3 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.62■□□□□ 0.41
USP50Q70EL3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.62■□□□□ 0.41
USP50Q70EL3 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.62■□□□□ 0.41
USP50Q70EL3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.62■□□□□ 0.41
USP50Q70EL3 AC005041.3-201ENST00000606287 649 ntBASIC17.62■□□□□ 0.41
USP50Q70EL3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.62■□□□□ 0.41
USP50Q70EL3 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.62■□□□□ 0.41
USP50Q70EL3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
USP50Q70EL3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.62■□□□□ 0.41
USP50Q70EL3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP50Q70EL3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.61■□□□□ 0.41
USP50Q70EL3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.61■□□□□ 0.41
USP50Q70EL3 AC112504.1-201ENST00000623415 1841 ntBASIC17.61■□□□□ 0.41
USP50Q70EL3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP50Q70EL3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms