Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 RPL8P2-201ENST00000430538 502 ntBASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 AC078991.1-201ENST00000437297 610 ntBASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 AL035414.1-201ENST00000451327 857 ntBASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 CFL1-206ENST00000527344 962 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CCDC141Q6ZP82 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 RNA5SP359-201ENST00000364838 113 ntBASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 TMBIM7P-202ENST00000641474 1516 ntBASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CCDC141Q6ZP82 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC22.27■■□□□ 1.15
CCDC141Q6ZP82 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
CCDC141Q6ZP82 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CCDC141Q6ZP82 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.15
CCDC141Q6ZP82 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CCDC141Q6ZP82 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC22.27■■□□□ 1.15
CCDC141Q6ZP82 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC22.27■■□□□ 1.15
CCDC141Q6ZP82 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CCDC141Q6ZP82 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CCDC141Q6ZP82 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CCDC141Q6ZP82 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 RAN-210ENST00000541630 1475 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 AC074138.1-201ENST00000611182 1303 ntBASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 MIR557-201ENST00000385239 98 ntBASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 FOS-204ENST00000554617 796 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 MIR3188-201ENST00000583494 85 ntBASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 AC092171.5-201ENST00000608012 942 ntBASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 WT1-AS_6.1-201ENST00000614919 121 ntBASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC141Q6ZP82 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 MIR4750-201ENST00000584564 56 ntBASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 AC005632.3-201ENST00000605544 308 ntBASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC141Q6ZP82 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms