Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 USP32P1-208ENST00000506594 1164 ntBASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 KRT17P8-201ENST00000540749 863 ntBASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 AC093813.1-201ENST00000605066 256 ntBASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 AL138799.1-201ENST00000448213 1675 ntBASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 SLC25A47P1-201ENST00000531577 414 ntBASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 AC015936.2-201ENST00000593177 259 ntBASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 AL162274.1-201ENST00000617191 1098 ntBASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFWD3Q6PCD5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFWD3Q6PCD5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 CROCCP4-201ENST00000457096 498 ntBASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 GPR53P-205ENST00000457298 1084 ntBASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 AC093433.1-201ENST00000458048 571 ntBASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.95■□□□□ 0.14
RFWD3Q6PCD5 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms