Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 AC027796.2-201ENST00000575326 344 ntBASIC13.38□□□□□ -0.27
HIST1H3AP68431 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 MIR8072-201ENST00000614241 80 ntBASIC13.38□□□□□ -0.27
HIST1H3AP68431 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 AJ011932.1-201ENST00000621707 465 ntBASIC13.38□□□□□ -0.27
HIST1H3AP68431 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 AL359258.3-201ENST00000622910 2331 ntBASIC13.38□□□□□ -0.27
HIST1H3AP68431 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 DFFBP1-201ENST00000433250 979 ntBASIC13.37□□□□□ -0.27
HIST1H3AP68431 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H3AP68431 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H3AP68431 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 AC007292.2-201ENST00000593524 1812 ntBASIC13.36□□□□□ -0.27
HIST1H3AP68431 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 AL391825.1-201ENST00000457671 1364 ntBASIC13.36□□□□□ -0.27
HIST1H3AP68431 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 AL158070.2-201ENST00000623713 1621 ntBASIC13.36□□□□□ -0.27
HIST1H3AP68431 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms