Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
UBE2D3P61077 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D3P61077 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
UBE2D3P61077 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 SPDYE7P-202ENST00000420373 878 ntBASIC10.96□□□□□ -0.65
UBE2D3P61077 COX10-202ENST00000429152 875 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D3P61077 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC10.96□□□□□ -0.65
UBE2D3P61077 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D3P61077 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D3P61077 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D3P61077 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.96□□□□□ -0.65
UBE2D3P61077 AL079307.3-201ENST00000556114 283 ntBASIC10.96□□□□□ -0.65
UBE2D3P61077 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.96□□□□□ -0.65
UBE2D3P61077 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 MIR6069-201ENST00000620069 79 ntBASIC10.96□□□□□ -0.65
UBE2D3P61077 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
UBE2D3P61077 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D3P61077 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
UBE2D3P61077 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
UBE2D3P61077 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.66
UBE2D3P61077 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 PTENP1-202ENST00000532280 3996 ntBASIC10.96□□□□□ -0.66
UBE2D3P61077 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.66
UBE2D3P61077 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.96□□□□□ -0.66
UBE2D3P61077 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
UBE2D3P61077 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D3P61077 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AC097376.2-205ENST00000610159 5334 ntBASIC10.95□□□□□ -0.66
UBE2D3P61077 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 SERBP1P3-201ENST00000459980 809 ntBASIC10.95□□□□□ -0.66
UBE2D3P61077 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D3P61077 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 SLED1-202ENST00000512051 380 ntBASIC10.95□□□□□ -0.66
UBE2D3P61077 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D3P61077 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D3P61077 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D3P61077 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 MIR4453-201ENST00000584019 89 ntBASIC10.95□□□□□ -0.66
UBE2D3P61077 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms