Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.84□□□□□ -0.67
CKS1BP61024 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS1BP61024 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS1BP61024 PRELID1P1-202ENST00000567272 903 ntBASIC10.84□□□□□ -0.67
CKS1BP61024 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 AC005593.1-201ENST00000624894 515 ntBASIC10.84□□□□□ -0.67
CKS1BP61024 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS1BP61024 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS1BP61024 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CKS1BP61024 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS1BP61024 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CKS1BP61024 AC091951.1-201ENST00000512854 2465 ntBASIC10.84□□□□□ -0.67
CKS1BP61024 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS1BP61024 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
CKS1BP61024 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS1BP61024 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS1BP61024 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS1BP61024 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS1BP61024 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS1BP61024 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS1BP61024 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
CKS1BP61024 TMBIM7P-203ENST00000641617 1718 ntBASIC10.84□□□□□ -0.67
CKS1BP61024 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS1BP61024 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS1BP61024 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 AC090114.2-201ENST00000608477 7054 ntBASIC10.83□□□□□ -0.68
CKS1BP61024 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 AC016027.1-202ENST00000607927 1699 ntBASIC10.83□□□□□ -0.68
CKS1BP61024 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
CKS1BP61024 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC10.83□□□□□ -0.68
CKS1BP61024 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 VMO1-203ENST00000416307 712 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.83□□□□□ -0.68
CKS1BP61024 MDH2-205ENST00000461263 648 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC10.83□□□□□ -0.68
CKS1BP61024 MIR4515-201ENST00000584082 81 ntBASIC10.83□□□□□ -0.68
CKS1BP61024 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC10.83□□□□□ -0.68
CKS1BP61024 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 AC008667.4-201ENST00000607370 168 ntBASIC10.83□□□□□ -0.68
CKS1BP61024 AL365330.1-201ENST00000607459 531 ntBASIC10.83□□□□□ -0.68
CKS1BP61024 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 AL357140.3-201ENST00000639753 1983 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms