Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDC42P60953 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC42P60953 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.05□□□□□ -0.16
CDC42P60953 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CDC42P60953 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDC42P60953 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC42P60953 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CDC42P60953 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC42P60953 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC42P60953 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CDC42P60953 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 AC138969.3-201ENST00000546612 1459 ntBASIC14.05□□□□□ -0.16
CDC42P60953 AC138932.2-201ENST00000548268 1459 ntBASIC14.05□□□□□ -0.16
CDC42P60953 AC126755.4-201ENST00000549796 1459 ntBASIC14.05□□□□□ -0.16
CDC42P60953 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 AP001267.2-201ENST00000532619 2086 ntBASIC14.05□□□□□ -0.16
CDC42P60953 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC42P60953 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC42P60953 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CDC42P60953 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC42P60953 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDC42P60953 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CDC42P60953 AL671277.1-201ENST00000429656 993 ntBASIC14.04□□□□□ -0.16
CDC42P60953 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 AC079781.3-201ENST00000449110 356 ntBASIC14.04□□□□□ -0.16
CDC42P60953 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.04□□□□□ -0.16
CDC42P60953 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC42P60953 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.04□□□□□ -0.16
CDC42P60953 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC42P60953 AL662844.1-201ENST00000546340 181 ntBASIC14.04□□□□□ -0.16
CDC42P60953 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.04□□□□□ -0.16
CDC42P60953 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CDC42P60953 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 AC015802.1-201ENST00000588104 1449 ntBASIC14.04□□□□□ -0.16
CDC42P60953 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC42P60953 AC007787.1-201ENST00000588095 1583 ntBASIC14.04□□□□□ -0.16
CDC42P60953 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC42P60953 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42P60953 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 AC131212.3-201ENST00000624087 4219 ntBASIC14.03□□□□□ -0.16
CDC42P60953 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
CDC42P60953 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms