Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.77□□□□□ -0.36
RIPPLY3P57055 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 AC116345.2-201ENST00000512837 523 ntBASIC12.77□□□□□ -0.37
RIPPLY3P57055 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 Z97205.2-201ENST00000564697 1639 ntBASIC12.77□□□□□ -0.37
RIPPLY3P57055 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RIPPLY3P57055 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
RIPPLY3P57055 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 CNN2P10-201ENST00000443067 918 ntBASIC12.76□□□□□ -0.37
RIPPLY3P57055 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 AC242376.2-201ENST00000619355 883 ntBASIC12.76□□□□□ -0.37
RIPPLY3P57055 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 AC007787.1-201ENST00000588095 1583 ntBASIC12.76□□□□□ -0.37
RIPPLY3P57055 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RIPPLY3P57055 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.76□□□□□ -0.37
RIPPLY3P57055 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms