Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CLDN12P56749 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
CLDN12P56749 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN12P56749 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.36□□□□□ -0.27
CLDN12P56749 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN12P56749 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLDN12P56749 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN12P56749 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN12P56749 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CLDN12P56749 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 BEND3P1-201ENST00000421591 1944 ntBASIC13.35□□□□□ -0.27
CLDN12P56749 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.35□□□□□ -0.27
CLDN12P56749 REXO1L4P-201ENST00000605109 1937 ntBASIC13.35□□□□□ -0.27
CLDN12P56749 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLDN12P56749 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN12P56749 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN12P56749 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN12P56749 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLDN12P56749 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CLDN12P56749 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN12P56749 MIR346-201ENST00000362234 95 ntBASIC13.35□□□□□ -0.27
CLDN12P56749 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN12P56749 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN12P56749 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN12P56749 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN12P56749 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN12P56749 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN12P56749 AC091812.2-201ENST00000619081 385 ntBASIC13.35□□□□□ -0.27
CLDN12P56749 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.35□□□□□ -0.27
CLDN12P56749 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 AP3S2-216ENST00000617003 1561 ntBASIC13.35□□□□□ -0.27
CLDN12P56749 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 AC152010.1-201ENST00000415779 2006 ntBASIC13.35□□□□□ -0.27
CLDN12P56749 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLDN12P56749 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN12P56749 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN12P56749 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms