Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDH6P55285 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDH6P55285 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDH6P55285 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 MEP1AP4-201ENST00000423244 1087 ntBASIC15.93■□□□□ 0.14
CDH6P55285 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 BCRP1-201ENST00000444246 691 ntBASIC15.93■□□□□ 0.14
CDH6P55285 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.93■□□□□ 0.14
CDH6P55285 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.93■□□□□ 0.14
CDH6P55285 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 AC107373.2-201ENST00000607735 490 ntBASIC15.93■□□□□ 0.14
CDH6P55285 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.93■□□□□ 0.14
CDH6P55285 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CDH6P55285 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH6P55285 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CDH6P55285 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CDH6P55285 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CDH6P55285 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CDH6P55285 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CDH6P55285 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CDH6P55285 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH6P55285 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH6P55285 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH6P55285 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH6P55285 FAM207CP-201ENST00000443486 507 ntBASIC15.92■□□□□ 0.14
CDH6P55285 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH6P55285 TSPY16P-201ENST00000449843 468 ntBASIC15.92■□□□□ 0.14
CDH6P55285 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.92■□□□□ 0.14
CDH6P55285 VDAC1P7-201ENST00000462417 847 ntBASIC15.92■□□□□ 0.14
CDH6P55285 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.92■□□□□ 0.14
CDH6P55285 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.92■□□□□ 0.14
CDH6P55285 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.92■□□□□ 0.14
CDH6P55285 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH6P55285 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.92■□□□□ 0.14
CDH6P55285 AL662799.1-202ENST00000614205 422 ntBASIC15.92■□□□□ 0.14
CDH6P55285 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDH6P55285 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms