Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN4P51793 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN4P51793 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCN4P51793 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
CLCN4P51793 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN4P51793 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCN4P51793 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CLCN4P51793 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLCN4P51793 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CLCN4P51793 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.96■□□□□ 0.15
CLCN4P51793 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.96■□□□□ 0.15
CLCN4P51793 RNMTL1P1-201ENST00000454103 560 ntBASIC15.96■□□□□ 0.15
CLCN4P51793 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLCN4P51793 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN4P51793 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN4P51793 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN4P51793 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCN4P51793 BNIP3P13-201ENST00000599968 566 ntBASIC15.96■□□□□ 0.15
CLCN4P51793 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN4P51793 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCN4P51793 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLCN4P51793 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.96■□□□□ 0.14
CLCN4P51793 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLCN4P51793 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CLCN4P51793 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCN4P51793 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.96■□□□□ 0.14
CLCN4P51793 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.95■□□□□ 0.14
CLCN4P51793 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN4P51793 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN4P51793 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN4P51793 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 AP000593.2-201ENST00000542775 1433 ntBASIC15.95■□□□□ 0.14
CLCN4P51793 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN4P51793 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLCN4P51793 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN4P51793 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN4P51793 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLCN4P51793 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.95■□□□□ 0.14
CLCN4P51793 FXNP2-201ENST00000411625 547 ntBASIC15.95■□□□□ 0.14
CLCN4P51793 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCN4P51793 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCN4P51793 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN4P51793 Z97180.1-201ENST00000445173 988 ntBASIC15.95■□□□□ 0.14
CLCN4P51793 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 AC026434.2-201ENST00000506094 1078 ntBASIC15.95■□□□□ 0.14
CLCN4P51793 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCN4P51793 AC013355.1-201ENST00000562625 723 ntBASIC15.95■□□□□ 0.14
CLCN4P51793 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CLCN4P51793 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CLCN4P51793 AC100757.4-201ENST00000626934 759 ntBASIC15.95■□□□□ 0.14
CLCN4P51793 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CLCN4P51793 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN4P51793 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 AC008741.2-201ENST00000612792 3115 ntBASIC15.95■□□□□ 0.14
CLCN4P51793 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.95■□□□□ 0.14
CLCN4P51793 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCN4P51793 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN4P51793 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN4P51793 AC105917.1-201ENST00000506637 2539 ntBASIC15.95■□□□□ 0.14
CLCN4P51793 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CLCN4P51793 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CLCN4P51793 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 FKBP4P6-201ENST00000457486 1332 ntBASIC15.94■□□□□ 0.14
CLCN4P51793 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms