Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.35□□□□□ -0.43
RAB5CP51148 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RAB5CP51148 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.35□□□□□ -0.43
RAB5CP51148 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.35□□□□□ -0.43
RAB5CP51148 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 AP000845.1-201ENST00000581677 2131 ntBASIC12.35□□□□□ -0.43
RAB5CP51148 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5CP51148 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5CP51148 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5CP51148 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5CP51148 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RAB5CP51148 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RAB5CP51148 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
RAB5CP51148 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5CP51148 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5CP51148 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.34□□□□□ -0.43
RAB5CP51148 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RAB5CP51148 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.34□□□□□ -0.43
RAB5CP51148 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.34□□□□□ -0.43
RAB5CP51148 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
RAB5CP51148 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB5CP51148 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
RAB5CP51148 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms