Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.93■□□□□ 0.46
NEDD4P46934 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.93■□□□□ 0.46
NEDD4P46934 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NEDD4P46934 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
NEDD4P46934 AC119751.2-201ENST00000504529 210 ntBASIC17.93■□□□□ 0.46
NEDD4P46934 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.93■□□□□ 0.46
NEDD4P46934 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.93■□□□□ 0.46
NEDD4P46934 RAB43P1-201ENST00000561790 589 ntBASIC17.93■□□□□ 0.46
NEDD4P46934 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 AP002414.2-201ENST00000591780 3365 ntBASIC17.93■□□□□ 0.46
NEDD4P46934 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NEDD4P46934 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.92■□□□□ 0.46
NEDD4P46934 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.92■□□□□ 0.46
NEDD4P46934 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 MIR1909-201ENST00000411312 80 ntBASIC17.92■□□□□ 0.46
NEDD4P46934 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.92■□□□□ 0.46
NEDD4P46934 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.92■□□□□ 0.46
NEDD4P46934 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.92■□□□□ 0.46
NEDD4P46934 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 ECM1P1-201ENST00000604092 1279 ntBASIC17.92■□□□□ 0.46
NEDD4P46934 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NEDD4P46934 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 AC099063.4-201ENST00000641099 1602 ntBASIC17.92■□□□□ 0.46
NEDD4P46934 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 AC023090.2-201ENST00000625182 2110 ntBASIC17.92■□□□□ 0.46
NEDD4P46934 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD4P46934 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD4P46934 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.91■□□□□ 0.46
NEDD4P46934 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NEDD4P46934 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NEDD4P46934 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.91■□□□□ 0.46
NEDD4P46934 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.91■□□□□ 0.46
NEDD4P46934 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.91■□□□□ 0.46
NEDD4P46934 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NEDD4P46934 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.91■□□□□ 0.46
NEDD4P46934 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.91■□□□□ 0.46
NEDD4P46934 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 ARSEP1-201ENST00000420443 635 ntBASIC17.91■□□□□ 0.46
NEDD4P46934 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.91■□□□□ 0.46
NEDD4P46934 FAM197Y7-201ENST00000432892 766 ntBASIC17.91■□□□□ 0.46
NEDD4P46934 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD4P46934 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.91■□□□□ 0.46
NEDD4P46934 GPR53P-205ENST00000457298 1084 ntBASIC17.91■□□□□ 0.46
NEDD4P46934 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.91■□□□□ 0.46
NEDD4P46934 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.91■□□□□ 0.46
NEDD4P46934 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.91■□□□□ 0.46
NEDD4P46934 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms