Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.65■□□□□ 0.26
HTTP42858 AC133540.1-201ENST00000620845 1019 ntBASIC16.65■□□□□ 0.26
HTTP42858 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.65■□□□□ 0.26
HTTP42858 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.65■□□□□ 0.26
HTTP42858 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.65■□□□□ 0.26
HTTP42858 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTTP42858 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTTP42858 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HTTP42858 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTTP42858 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTTP42858 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HTTP42858 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HTTP42858 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC16.65■□□□□ 0.26
HTTP42858 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HTTP42858 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.65■□□□□ 0.26
HTTP42858 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HTTP42858 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.65■□□□□ 0.26
HTTP42858 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.65■□□□□ 0.26
HTTP42858 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTTP42858 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTTP42858 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HTTP42858 ABHD17AP9-201ENST00000561925 548 ntBASIC16.65■□□□□ 0.26
HTTP42858 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.65■□□□□ 0.26
HTTP42858 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.65■□□□□ 0.26
HTTP42858 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HTTP42858 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HTTP42858 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.64■□□□□ 0.25
HTTP42858 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.64■□□□□ 0.25
HTTP42858 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 ALG3P1-201ENST00000508806 1114 ntBASIC16.64■□□□□ 0.25
HTTP42858 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.64■□□□□ 0.25
HTTP42858 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.64■□□□□ 0.25
HTTP42858 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.64■□□□□ 0.25
HTTP42858 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HTTP42858 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HTTP42858 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.64■□□□□ 0.25
HTTP42858 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HTTP42858 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HTTP42858 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.64■□□□□ 0.25
HTTP42858 IGHEP1-201ENST00000521393 651 ntBASIC16.64■□□□□ 0.25
HTTP42858 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.64■□□□□ 0.25
HTTP42858 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.64■□□□□ 0.25
HTTP42858 AC008825.2-201ENST00000603374 718 ntBASIC16.64■□□□□ 0.25
HTTP42858 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTTP42858 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.64■□□□□ 0.25
HTTP42858 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.64■□□□□ 0.25
HTTP42858 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.63■□□□□ 0.25
HTTP42858 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HTTP42858 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTTP42858 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.63■□□□□ 0.25
HTTP42858 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HTTP42858 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.63■□□□□ 0.25
HTTP42858 AC008972.2-201ENST00000606587 494 ntBASIC16.63■□□□□ 0.25
HTTP42858 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.63■□□□□ 0.25
HTTP42858 AC233280.19-201ENST00000633223 136 ntBASIC16.63■□□□□ 0.25
HTTP42858 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTTP42858 AL513523.2-202ENST00000427283 2040 ntBASIC16.63■□□□□ 0.25
HTTP42858 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HTTP42858 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTTP42858 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.63■□□□□ 0.25
HTTP42858 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTTP42858 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC16.63■□□□□ 0.25
HTTP42858 AC021016.3-201ENST00000608367 477 ntBASIC16.63■□□□□ 0.25
HTTP42858 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.63■□□□□ 0.25
HTTP42858 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTTP42858 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTTP42858 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.63■□□□□ 0.25
HTTP42858 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTTP42858 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HTTP42858 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HTTP42858 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.63■□□□□ 0.25
HTTP42858 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.63■□□□□ 0.25
HTTP42858 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC16.63■□□□□ 0.25
HTTP42858 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.63■□□□□ 0.25
HTTP42858 MIR3188-201ENST00000583494 85 ntBASIC16.63■□□□□ 0.25
HTTP42858 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms