Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOBEC1P41238 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOBEC1P41238 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOBEC1P41238 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOBEC1P41238 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.84□□□□□ -0.19
APOBEC1P41238 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOBEC1P41238 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
APOBEC1P41238 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.83□□□□□ -0.19
APOBEC1P41238 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
APOBEC1P41238 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
APOBEC1P41238 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.83□□□□□ -0.19
APOBEC1P41238 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
APOBEC1P41238 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
APOBEC1P41238 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.83□□□□□ -0.2
APOBEC1P41238 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.83□□□□□ -0.2
APOBEC1P41238 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
APOBEC1P41238 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 AC098614.1-201ENST00000368528 745 ntBASIC13.83□□□□□ -0.2
APOBEC1P41238 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
APOBEC1P41238 DGCR5-201ENST00000399539 862 ntBASIC13.83□□□□□ -0.2
APOBEC1P41238 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.83□□□□□ -0.2
APOBEC1P41238 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.83□□□□□ -0.2
APOBEC1P41238 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.83□□□□□ -0.2
APOBEC1P41238 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
APOBEC1P41238 AP001063.1-201ENST00000568332 529 ntBASIC13.83□□□□□ -0.2
APOBEC1P41238 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.83□□□□□ -0.2
APOBEC1P41238 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
APOBEC1P41238 AP005019.2-201ENST00000615104 511 ntBASIC13.83□□□□□ -0.2
APOBEC1P41238 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.83□□□□□ -0.2
APOBEC1P41238 CU634019.7-201ENST00000624153 1185 ntBASIC13.83□□□□□ -0.2
APOBEC1P41238 FP236241.2-201ENST00000624906 1185 ntBASIC13.83□□□□□ -0.2
APOBEC1P41238 AL033527.5-201ENST00000641382 801 ntBASIC13.83□□□□□ -0.2
APOBEC1P41238 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.83□□□□□ -0.2
APOBEC1P41238 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
APOBEC1P41238 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.83□□□□□ -0.2
APOBEC1P41238 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
APOBEC1P41238 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
APOBEC1P41238 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
APOBEC1P41238 LILRP1-201ENST00000444199 1370 ntBASIC13.83□□□□□ -0.2
APOBEC1P41238 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOBEC1P41238 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
APOBEC1P41238 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.82□□□□□ -0.2
APOBEC1P41238 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.82□□□□□ -0.2
APOBEC1P41238 ACE3P-201ENST00000423435 1973 ntBASIC13.82□□□□□ -0.2
APOBEC1P41238 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.82□□□□□ -0.2
APOBEC1P41238 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
APOBEC1P41238 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
APOBEC1P41238 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.82□□□□□ -0.2
APOBEC1P41238 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
APOBEC1P41238 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.82□□□□□ -0.2
APOBEC1P41238 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.82□□□□□ -0.2
APOBEC1P41238 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.82□□□□□ -0.2
APOBEC1P41238 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.82□□□□□ -0.2
APOBEC1P41238 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.82□□□□□ -0.2
APOBEC1P41238 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.82□□□□□ -0.2
APOBEC1P41238 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.82□□□□□ -0.2
APOBEC1P41238 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.82□□□□□ -0.2
APOBEC1P41238 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 AL161772.1-201ENST00000610494 4412 ntBASIC13.82□□□□□ -0.2
APOBEC1P41238 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.82□□□□□ -0.2
APOBEC1P41238 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.82□□□□□ -0.2
APOBEC1P41238 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.82□□□□□ -0.2
APOBEC1P41238 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.82□□□□□ -0.2
APOBEC1P41238 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms