Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.33■□□□□ 0.52
HOXA10P31260 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXA10P31260 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.33■□□□□ 0.52
HOXA10P31260 PHBP15-201ENST00000574228 665 ntBASIC18.33■□□□□ 0.52
HOXA10P31260 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.33■□□□□ 0.52
HOXA10P31260 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.33■□□□□ 0.52
HOXA10P31260 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXA10P31260 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA10P31260 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA10P31260 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HOXA10P31260 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXA10P31260 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA10P31260 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA10P31260 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA10P31260 LINC02199-201ENST00000506655 2702 ntBASIC18.33■□□□□ 0.52
HOXA10P31260 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA10P31260 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HOXA10P31260 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.33■□□□□ 0.52
HOXA10P31260 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA10P31260 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA10P31260 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXA10P31260 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
HOXA10P31260 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 AP000845.1-201ENST00000581677 2131 ntBASIC18.32■□□□□ 0.52
HOXA10P31260 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HOXA10P31260 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXA10P31260 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HOXA10P31260 AC074138.1-201ENST00000611182 1303 ntBASIC18.32■□□□□ 0.52
HOXA10P31260 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXA10P31260 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.32■□□□□ 0.52
HOXA10P31260 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.32■□□□□ 0.52
HOXA10P31260 AC008723.1-201ENST00000506922 207 ntBASIC18.32■□□□□ 0.52
HOXA10P31260 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXA10P31260 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXA10P31260 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.32■□□□□ 0.52
HOXA10P31260 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXA10P31260 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXA10P31260 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HOXA10P31260 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXA10P31260 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.32■□□□□ 0.52
HOXA10P31260 MIR6769A-201ENST00000617340 73 ntBASIC18.32■□□□□ 0.52
HOXA10P31260 AC242376.2-201ENST00000619355 883 ntBASIC18.32■□□□□ 0.52
HOXA10P31260 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.32■□□□□ 0.52
HOXA10P31260 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 AL513523.2-202ENST00000427283 2040 ntBASIC18.32■□□□□ 0.52
HOXA10P31260 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HOXA10P31260 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXA10P31260 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXA10P31260 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 ZBED1P1-201ENST00000502364 1930 ntBASIC18.31■□□□□ 0.52
HOXA10P31260 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 CAP2P1-201ENST00000557743 1390 ntBASIC18.31■□□□□ 0.52
HOXA10P31260 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.31■□□□□ 0.52
HOXA10P31260 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
HOXA10P31260 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.31■□□□□ 0.52
HOXA10P31260 SALL4P5-201ENST00000419001 1760 ntBASIC18.31■□□□□ 0.52
HOXA10P31260 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HOXA10P31260 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXA10P31260 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXA10P31260 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXA10P31260 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXA10P31260 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms