Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA3P22001 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA3P22001 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
KCNA3P22001 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KCNA3P22001 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
KCNA3P22001 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA3P22001 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA3P22001 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA3P22001 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA3P22001 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNA3P22001 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA3P22001 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNA3P22001 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KCNA3P22001 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
KCNA3P22001 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.37■□□□□ 0.53
KCNA3P22001 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.37■□□□□ 0.53
KCNA3P22001 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.37■□□□□ 0.53
KCNA3P22001 LINC00634-202ENST00000505157 222 ntBASIC18.37■□□□□ 0.53
KCNA3P22001 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.37■□□□□ 0.53
KCNA3P22001 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.37■□□□□ 0.53
KCNA3P22001 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 MIR3188-201ENST00000583494 85 ntBASIC18.37■□□□□ 0.53
KCNA3P22001 EIF5AP2-201ENST00000585668 1047 ntBASIC18.37■□□□□ 0.53
KCNA3P22001 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.37■□□□□ 0.53
KCNA3P22001 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNA3P22001 AC092364.2-201ENST00000596710 2692 ntBASIC18.37■□□□□ 0.53
KCNA3P22001 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.37■□□□□ 0.53
KCNA3P22001 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KCNA3P22001 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 LINC02447-202ENST00000501888 2146 ntBASIC18.37■□□□□ 0.53
KCNA3P22001 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA3P22001 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KCNA3P22001 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
KCNA3P22001 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA3P22001 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
KCNA3P22001 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA3P22001 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA3P22001 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
KCNA3P22001 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC18.36■□□□□ 0.53
KCNA3P22001 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.36■□□□□ 0.53
KCNA3P22001 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA3P22001 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA3P22001 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNA3P22001 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.36■□□□□ 0.53
KCNA3P22001 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNA3P22001 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA3P22001 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA3P22001 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.35■□□□□ 0.53
KCNA3P22001 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA3P22001 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA3P22001 RPL5P21-201ENST00000404620 815 ntBASIC18.35■□□□□ 0.53
KCNA3P22001 BCAS2P2-201ENST00000425064 674 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms