Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 AL033527.5-202ENST00000641632 1098 ntBASIC14.27□□□□□ -0.13
TNFRSF1BP20333 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 CETN4P-206ENST00000642099 2168 ntBASIC14.26□□□□□ -0.13
TNFRSF1BP20333 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 AC113367.3-201ENST00000508316 1912 ntBASIC14.26□□□□□ -0.13
TNFRSF1BP20333 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 AC112482.1-201ENST00000492080 688 ntBASIC14.26□□□□□ -0.13
TNFRSF1BP20333 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 AC018442.1-201ENST00000421439 2061 ntBASIC14.26□□□□□ -0.13
TNFRSF1BP20333 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFRSF1BP20333 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 AC012508.2-201ENST00000567613 1472 ntBASIC14.25□□□□□ -0.13
TNFRSF1BP20333 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 AL133267.1-201ENST00000398220 340 ntBASIC14.25□□□□□ -0.13
TNFRSF1BP20333 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 RPL13P2-201ENST00000440687 659 ntBASIC14.25□□□□□ -0.13
TNFRSF1BP20333 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms