Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC069304.3-201ENST00000603938 1084 ntBASIC18.08■□□□□ 0.48
MYCNP04198 AC008592.5-201ENST00000607856 547 ntBASIC18.08■□□□□ 0.48
MYCNP04198 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.08■□□□□ 0.48
MYCNP04198 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
MYCNP04198 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.08■□□□□ 0.48
MYCNP04198 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.08■□□□□ 0.48
MYCNP04198 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 LINC00958-201ENST00000504230 1558 ntTSL 2 BASIC18.08■□□□□ 0.48
MYCNP04198 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 AL133338.1-201ENST00000565695 1517 ntBASIC18.08■□□□□ 0.48
MYCNP04198 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MYCNP04198 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MYCNP04198 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MYCNP04198 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.07■□□□□ 0.48
MYCNP04198 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
MYCNP04198 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
MYCNP04198 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 RPL35P3-201ENST00000403133 371 ntBASIC18.07■□□□□ 0.48
MYCNP04198 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.07■□□□□ 0.48
MYCNP04198 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MYCNP04198 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC18.07■□□□□ 0.48
MYCNP04198 HNRNPA1P22-201ENST00000437295 946 ntBASIC18.07■□□□□ 0.48
MYCNP04198 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 RPL12P33-201ENST00000485633 492 ntBASIC18.07■□□□□ 0.48
MYCNP04198 AC021106.1-201ENST00000509020 1058 ntBASIC18.07■□□□□ 0.48
MYCNP04198 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC18.07■□□□□ 0.48
MYCNP04198 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
MYCNP04198 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.07■□□□□ 0.48
MYCNP04198 RARRES2P5-201ENST00000564013 466 ntBASIC18.07■□□□□ 0.48
MYCNP04198 RRP7BP-205ENST00000566851 833 ntBASIC18.07■□□□□ 0.48
MYCNP04198 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC18.07■□□□□ 0.48
MYCNP04198 MND1-206ENST00000622785 830 ntTSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 AC025268.1-201ENST00000632192 1199 ntBASIC18.07■□□□□ 0.48
MYCNP04198 AC006927.3-201ENST00000638789 384 ntBASIC18.07■□□□□ 0.48
MYCNP04198 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.07■□□□□ 0.48
MYCNP04198 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 AL118508.1-201ENST00000613502 2345 ntBASIC18.07■□□□□ 0.48
MYCNP04198 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.07■□□□□ 0.48
MYCNP04198 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MYCNP04198 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MYCNP04198 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MYCNP04198 AL136982.4-201ENST00000437689 1740 ntBASIC18.06■□□□□ 0.48
MYCNP04198 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MYCNP04198 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.06■□□□□ 0.48
MYCNP04198 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MYCNP04198 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
MYCNP04198 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.06■□□□□ 0.48
MYCNP04198 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.06■□□□□ 0.48
MYCNP04198 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MYCNP04198 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.06■□□□□ 0.48
MYCNP04198 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MYCNP04198 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.06■□□□□ 0.48
MYCNP04198 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MYCNP04198 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MYCNP04198 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MYCNP04198 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MYCNP04198 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms