RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 AEBP2Q6ZN18 517 aaPredicted RBP28.41■■■□□ 2.14
PHF11-215ENST00000488958 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
PHF11-215ENST00000488958 PHF23Q9BUL5 403 aaPredicted RBP24.75■■□□□ 1.55
PHF11-215ENST00000488958 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
PHF11-215ENST00000488958 PLPPR3Q6T4P5 718 aa22.97■■□□□ 1.27
PHF11-215ENST00000488958 FOXD1Q16676 465 aa22.28■■□□□ 1.16
PHF11-215ENST00000488958 ADRA2BP18089 450 aa21.75■■□□□ 1.07
PHF11-215ENST00000488958 PPP6R1Q9UPN7 881 aa21.74■■□□□ 1.07
PHF11-215ENST00000488958 PIAS4Q8N2W9 510 aaPredicted RBP21.1■□□□□ 0.97
PHF11-215ENST00000488958 MSH5O43196 834 aa20.38■□□□□ 0.85
PHF11-215ENST00000488958 PPP4R3CPQ6ZMV5 832 aa20.3■□□□□ 0.84
PHF11-215ENST00000488958 KCNA4P22459 653 aa20.25■□□□□ 0.83
PHF11-215ENST00000488958 POTEDQ86YR6 584 aa20.03■□□□□ 0.8
PHF11-215ENST00000488958 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
PHF11-215ENST00000488958 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
PHF11-215ENST00000488958 CNKSR2Q8WXI2 1034 aa19.64■□□□□ 0.73
PHF11-215ENST00000488958 MAPK8IP2Q13387 824 aaPredicted RBP19.63■□□□□ 0.73
PHF11-215ENST00000488958 NPM3O75607 178 aaKnown RBP19.57■□□□□ 0.72
PHF11-215ENST00000488958 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
PHF11-215ENST00000488958 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
PHF11-215ENST00000488958 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
PHF11-215ENST00000488958 RNF216Q9NWF9 866 aaPredicted RBP19.15■□□□□ 0.66
PHF11-215ENST00000488958 HOXD11P31277 338 aaPredicted RBP18.98■□□□□ 0.63
PHF11-215ENST00000488958 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
PHF11-215ENST00000488958 CSRNP3Q8WYN3 585 aa18.81■□□□□ 0.6
PHF11-215ENST00000488958 ZBTB22O15209 634 aa18.63■□□□□ 0.57
PHF11-215ENST00000488958 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
PHF11-215ENST00000488958 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
PHF11-215ENST00000488958 SLC4A2P04920 1241 aa18.4■□□□□ 0.54
PHF11-215ENST00000488958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
PHF11-215ENST00000488958 MYCNP04198 464 aaPredicted RBP18.07■□□□□ 0.48
PHF11-215ENST00000488958 U3KPZ7 1027 aaPredicted RBP17.85■□□□□ 0.45
PHF11-215ENST00000488958 ATXN8OSP0DMR3 200 aa17.82■□□□□ 0.44
PHF11-215ENST00000488958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
PHF11-215ENST00000488958 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
PHF11-215ENST00000488958 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.42
PHF11-215ENST00000488958 ATF5Q9Y2D1 282 aaPredicted RBP17.59■□□□□ 0.41
PHF11-215ENST00000488958 RNF39Q9H2S5 420 aa17.5■□□□□ 0.39
PHF11-215ENST00000488958 APLP2Q06481 763 aa17.47■□□□□ 0.39
PHF11-215ENST00000488958 C1QBPQ07021 282 aaKnown RBP17.31■□□□□ 0.36
PHF11-215ENST00000488958 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
PHF11-215ENST00000488958 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
PHF11-215ENST00000488958 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.34
PHF11-215ENST00000488958 CAPN15O75808 1086 aa17.2■□□□□ 0.34
PHF11-215ENST00000488958 FKBP8Q14318 412 aa17■□□□□ 0.31
PHF11-215ENST00000488958 POLA2Q14181 598 aa16.99■□□□□ 0.31
PHF11-215ENST00000488958 ABCB7O75027 752 aa16.91■□□□□ 0.3
PHF11-215ENST00000488958 MKRN4PQ13434 485 aaPredicted RBP16.83■□□□□ 0.28
PHF11-215ENST00000488958 FBLN2P98095 1184 aa16.82■□□□□ 0.28
PHF11-215ENST00000488958 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
PHF11-215ENST00000488958 DSG3P32926 999 aa16.79■□□□□ 0.28
PHF11-215ENST00000488958 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
PHF11-215ENST00000488958 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
PHF11-215ENST00000488958 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
PHF11-215ENST00000488958 PROM2Q8N271 834 aa16.37■□□□□ 0.21
PHF11-215ENST00000488958 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
PHF11-215ENST00000488958 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
PHF11-215ENST00000488958 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
PHF11-215ENST00000488958 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
PHF11-215ENST00000488958 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
PHF11-215ENST00000488958 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
PHF11-215ENST00000488958 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
PHF11-215ENST00000488958 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
PHF11-215ENST00000488958 RTN4Q9NQC3 1192 aaKnown RBP16.09■□□□□ 0.17
PHF11-215ENST00000488958 VASPP50552 380 aaPredicted RBP16.05■□□□□ 0.16
PHF11-215ENST00000488958 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
PHF11-215ENST00000488958 STAG3Q9UJ98 1225 aa15.93■□□□□ 0.14
PHF11-215ENST00000488958 IFNLR1Q8IU57 520 aaPredicted RBP15.87■□□□□ 0.13
PHF11-215ENST00000488958 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
PHF11-215ENST00000488958 PLCD3Q8N3E9 789 aa15.78■□□□□ 0.12
PHF11-215ENST00000488958 MIER1Q8N108 512 aa15.76■□□□□ 0.11
PHF11-215ENST00000488958 KLHL34Q8N239 644 aa15.74■□□□□ 0.11
PHF11-215ENST00000488958 REM2Q8IYK8 340 aaPredicted RBP15.73■□□□□ 0.11
PHF11-215ENST00000488958 SPDYE1Q8NFV5 336 aaPredicted RBP15.73■□□□□ 0.11
PHF11-215ENST00000488958 CLEC11AQ9Y240 323 aa15.68■□□□□ 0.1
PHF11-215ENST00000488958 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
PHF11-215ENST00000488958 SPOCK2Q92563 424 aa15.63■□□□□ 0.09
PHF11-215ENST00000488958 PRR29P0C7W0 189 aa15.58■□□□□ 0.08
PHF11-215ENST00000488958 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
PHF11-215ENST00000488958 ZBTB47Q9UFB7 747 aaPredicted RBP15.54■□□□□ 0.08
PHF11-215ENST00000488958 POTEHQ6S545 545 aa15.49■□□□□ 0.07
PHF11-215ENST00000488958 PKD2Q13563 968 aa15.47■□□□□ 0.07
PHF11-215ENST00000488958 CREBZFQ9NS37 354 aa15.44■□□□□ 0.06
PHF11-215ENST00000488958 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
PHF11-215ENST00000488958 ECM2O94769 699 aaPredicted RBP15.33■□□□□ 0.04
PHF11-215ENST00000488958 MNX1P50219 401 aaPredicted RBP15.32■□□□□ 0.04
PHF11-215ENST00000488958 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
PHF11-215ENST00000488958 NUBP1P53384 320 aa15.29■□□□□ 0.04
PHF11-215ENST00000488958 CHADLQ6NUI6 762 aa15.25■□□□□ 0.03
PHF11-215ENST00000488958 GSE1Q14687 1217 aa15.22■□□□□ 0.03
PHF11-215ENST00000488958 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
PHF11-215ENST00000488958 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
PHF11-215ENST00000488958 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
PHF11-215ENST00000488958 PRKAR2AP13861 404 aaKnown RBP15.17■□□□□ 0.02
PHF11-215ENST00000488958 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
PHF11-215ENST00000488958 RGL2O15211 777 aa15.16■□□□□ 0.02
PHF11-215ENST00000488958 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
PHF11-215ENST00000488958 FAM212AQ96EL1 285 aa15.16■□□□□ 0.02
PHF11-215ENST00000488958 RASEFQ8IZ41 740 aa15.15■□□□□ 0.02
PHF11-215ENST00000488958 FARP1Q9Y4F1 1045 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms