Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 AC092127.1-201ENST00000567093 3455 ntBASIC16.23■□□□□ 0.19
TIMP1P01033 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 BANF1P3-201ENST00000412556 261 ntBASIC16.23■□□□□ 0.19
TIMP1P01033 DUTP3-201ENST00000450025 415 ntBASIC16.23■□□□□ 0.19
TIMP1P01033 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.23■□□□□ 0.19
TIMP1P01033 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.23■□□□□ 0.19
TIMP1P01033 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.23■□□□□ 0.19
TIMP1P01033 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 MIR3188-201ENST00000583494 85 ntBASIC16.23■□□□□ 0.19
TIMP1P01033 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.23■□□□□ 0.19
TIMP1P01033 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 LINC01165-201ENST00000445190 1623 ntBASIC16.23■□□□□ 0.19
TIMP1P01033 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.22■□□□□ 0.19
TIMP1P01033 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TIMP1P01033 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.22■□□□□ 0.19
TIMP1P01033 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.22■□□□□ 0.19
TIMP1P01033 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.22■□□□□ 0.19
TIMP1P01033 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.22■□□□□ 0.19
TIMP1P01033 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.22■□□□□ 0.19
TIMP1P01033 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.22■□□□□ 0.19
TIMP1P01033 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 LYPLA2P1-203ENST00000447689 696 ntBASIC16.22■□□□□ 0.19
TIMP1P01033 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.22■□□□□ 0.19
TIMP1P01033 AC010234.1-201ENST00000494599 870 ntBASIC16.22■□□□□ 0.19
TIMP1P01033 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.22■□□□□ 0.19
TIMP1P01033 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.22■□□□□ 0.19
TIMP1P01033 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TIMP1P01033 AC105137.3-201ENST00000617588 984 ntBASIC16.22■□□□□ 0.19
TIMP1P01033 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.22■□□□□ 0.19
TIMP1P01033 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TIMP1P01033 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.22■□□□□ 0.19
TIMP1P01033 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.22■□□□□ 0.19
TIMP1P01033 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TIMP1P01033 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TIMP1P01033 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMP1P01033 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TIMP1P01033 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.21■□□□□ 0.19
TIMP1P01033 CYP4F23P-201ENST00000593402 1579 ntBASIC16.21■□□□□ 0.19
TIMP1P01033 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TIMP1P01033 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.21■□□□□ 0.19
TIMP1P01033 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.21■□□□□ 0.19
TIMP1P01033 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.21■□□□□ 0.19
TIMP1P01033 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TIMP1P01033 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TIMP1P01033 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TIMP1P01033 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TIMP1P01033 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms