Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 NKAIN1P1-201ENST00000435754 582 ntBASIC12.9□□□□□ -0.35
ABCA1O95477 EIF4HP1-201ENST00000453115 687 ntBASIC12.9□□□□□ -0.35
ABCA1O95477 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.9□□□□□ -0.35
ABCA1O95477 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
ABCA1O95477 AC026410.3-201ENST00000514280 936 ntBASIC12.9□□□□□ -0.35
ABCA1O95477 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
ABCA1O95477 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.9□□□□□ -0.35
ABCA1O95477 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
ABCA1O95477 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.9□□□□□ -0.35
ABCA1O95477 AC097724.1-201ENST00000609581 426 ntBASIC12.9□□□□□ -0.35
ABCA1O95477 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
ABCA1O95477 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.9□□□□□ -0.35
ABCA1O95477 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.9□□□□□ -0.35
ABCA1O95477 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
ABCA1O95477 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
ABCA1O95477 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.89□□□□□ -0.35
ABCA1O95477 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ABCA1O95477 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ABCA1O95477 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.89□□□□□ -0.35
ABCA1O95477 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 PHKG1P2-201ENST00000457537 863 ntBASIC12.89□□□□□ -0.35
ABCA1O95477 RN7SL769P-201ENST00000469386 295 ntBASIC12.89□□□□□ -0.35
ABCA1O95477 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ABCA1O95477 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 AC105129.2-201ENST00000559536 390 ntBASIC12.89□□□□□ -0.35
ABCA1O95477 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.89□□□□□ -0.35
ABCA1O95477 AC000095.1-201ENST00000603208 874 ntBASIC12.89□□□□□ -0.35
ABCA1O95477 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.89□□□□□ -0.35
ABCA1O95477 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.89□□□□□ -0.35
ABCA1O95477 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.89□□□□□ -0.35
ABCA1O95477 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ABCA1O95477 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ABCA1O95477 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.89□□□□□ -0.35
ABCA1O95477 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ABCA1O95477 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ABCA1O95477 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.88□□□□□ -0.35
ABCA1O95477 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ABCA1O95477 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
ABCA1O95477 CHMP4BP1-201ENST00000556017 588 ntBASIC12.88□□□□□ -0.35
ABCA1O95477 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ABCA1O95477 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.88□□□□□ -0.35
ABCA1O95477 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ABCA1O95477 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ABCA1O95477 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.88□□□□□ -0.35
ABCA1O95477 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ABCA1O95477 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ABCA1O95477 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ABCA1O95477 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ABCA1O95477 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ABCA1O95477 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ABCA1O95477 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.88□□□□□ -0.35
ABCA1O95477 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.88□□□□□ -0.35
ABCA1O95477 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms