Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC013726.1-201ENST00000563747 2285 ntBASIC22.31■■□□□ 1.16
RAPGEF3O95398 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 AL139384.1-201ENST00000612143 3047 ntBASIC22.31■■□□□ 1.16
RAPGEF3O95398 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 AL662844.4-201ENST00000606367 2838 ntBASIC22.3■■□□□ 1.16
RAPGEF3O95398 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 RHEB-207ENST00000496004 744 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 HERC2P11-201ENST00000562845 725 ntBASIC22.3■■□□□ 1.16
RAPGEF3O95398 AC100756.2-201ENST00000569537 736 ntBASIC22.3■■□□□ 1.16
RAPGEF3O95398 AP000322.3-201ENST00000608665 388 ntBASIC22.3■■□□□ 1.16
RAPGEF3O95398 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF3O95398 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF3O95398 AC112504.1-201ENST00000623415 1841 ntBASIC22.29■■□□□ 1.16
RAPGEF3O95398 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF3O95398 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF3O95398 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 PPIA-208ENST00000489459 907 ntTSL 2 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC068867.1-201ENST00000559855 150 ntBASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 FTLP5-201ENST00000586853 534 ntBASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC006548.2-201ENST00000605217 529 ntBASIC22.29■■□□□ 1.16
RAPGEF3O95398 AL022334.2-201ENST00000610000 484 ntBASIC22.29■■□□□ 1.16
RAPGEF3O95398 PPIA-210ENST00000620047 827 ntTSL 5 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC002044.2-201ENST00000624910 970 ntBASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF3O95398 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF3O95398 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF3O95398 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC22.29■■□□□ 1.16
RAPGEF3O95398 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF3O95398 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF3O95398 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 MIR566-201ENST00000385187 94 ntBASIC22.28■■□□□ 1.16
RAPGEF3O95398 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC22.28■■□□□ 1.16
RAPGEF3O95398 OR2R1P-201ENST00000441404 914 ntBASIC22.28■■□□□ 1.16
RAPGEF3O95398 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC22.28■■□□□ 1.16
RAPGEF3O95398 RN7SL494P-201ENST00000461517 304 ntBASIC22.28■■□□□ 1.16
RAPGEF3O95398 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC22.28■■□□□ 1.16
RAPGEF3O95398 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC22.28■■□□□ 1.16
RAPGEF3O95398 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RAPGEF3O95398 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC22.28■■□□□ 1.16
RAPGEF3O95398 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 AC007292.2-201ENST00000593524 1812 ntBASIC22.28■■□□□ 1.16
RAPGEF3O95398 AL672207.1-201ENST00000328462 1570 ntBASIC22.28■■□□□ 1.16
RAPGEF3O95398 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RAPGEF3O95398 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC22.28■■□□□ 1.16
RAPGEF3O95398 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF3O95398 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC22.28■■□□□ 1.16
RAPGEF3O95398 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC22.27■■□□□ 1.16
RAPGEF3O95398 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF3O95398 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF3O95398 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF3O95398 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RAPGEF3O95398 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms