Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.45■□□□□ 0.22
CSPG5O95196 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.45■□□□□ 0.22
CSPG5O95196 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.45■□□□□ 0.22
CSPG5O95196 MPRIPP1-201ENST00000452433 1089 ntBASIC16.45■□□□□ 0.22
CSPG5O95196 BX284668.4-201ENST00000453917 508 ntBASIC16.45■□□□□ 0.22
CSPG5O95196 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.45■□□□□ 0.22
CSPG5O95196 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.45■□□□□ 0.22
CSPG5O95196 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.45■□□□□ 0.22
CSPG5O95196 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 NDUFV2P1-201ENST00000596415 907 ntBASIC16.45■□□□□ 0.22
CSPG5O95196 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.45■□□□□ 0.22
CSPG5O95196 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CSPG5O95196 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CSPG5O95196 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.45■□□□□ 0.22
CSPG5O95196 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CSPG5O95196 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CSPG5O95196 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CSPG5O95196 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CSPG5O95196 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.44■□□□□ 0.22
CSPG5O95196 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG5O95196 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG5O95196 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.44■□□□□ 0.22
CSPG5O95196 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.44■□□□□ 0.22
CSPG5O95196 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG5O95196 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CSPG5O95196 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG5O95196 CNN2P10-201ENST00000443067 918 ntBASIC16.44■□□□□ 0.22
CSPG5O95196 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.44■□□□□ 0.22
CSPG5O95196 AC044849.1-201ENST00000519737 1188 ntBASIC16.44■□□□□ 0.22
CSPG5O95196 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG5O95196 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.44■□□□□ 0.22
CSPG5O95196 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.44■□□□□ 0.22
CSPG5O95196 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.44■□□□□ 0.22
CSPG5O95196 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.44■□□□□ 0.22
CSPG5O95196 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.44■□□□□ 0.22
CSPG5O95196 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG5O95196 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CSPG5O95196 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG5O95196 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.44■□□□□ 0.22
CSPG5O95196 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG5O95196 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.43■□□□□ 0.22
CSPG5O95196 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CSPG5O95196 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 AL513523.2-202ENST00000427283 2040 ntBASIC16.43■□□□□ 0.22
CSPG5O95196 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG5O95196 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CSPG5O95196 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.43■□□□□ 0.22
CSPG5O95196 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.43■□□□□ 0.22
CSPG5O95196 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CSPG5O95196 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CSPG5O95196 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.43■□□□□ 0.22
CSPG5O95196 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG5O95196 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.43■□□□□ 0.22
CSPG5O95196 RN7SL11P-201ENST00000471305 293 ntBASIC16.43■□□□□ 0.22
CSPG5O95196 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.43■□□□□ 0.22
CSPG5O95196 AC245884.6-201ENST00000515672 1067 ntBASIC16.43■□□□□ 0.22
CSPG5O95196 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG5O95196 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.43■□□□□ 0.22
CSPG5O95196 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.43■□□□□ 0.22
CSPG5O95196 MIR5572-201ENST00000583188 137 ntBASIC16.43■□□□□ 0.22
CSPG5O95196 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.43■□□□□ 0.22
CSPG5O95196 AC132938.4-201ENST00000623835 848 ntBASIC16.43■□□□□ 0.22
CSPG5O95196 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG5O95196 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG5O95196 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CSPG5O95196 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms