Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.05■□□□□ 0.32
CLSTN1O94985 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLSTN1O94985 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.04■□□□□ 0.32
CLSTN1O94985 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.04■□□□□ 0.32
CLSTN1O94985 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.04■□□□□ 0.32
CLSTN1O94985 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLSTN1O94985 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC17.04■□□□□ 0.32
CLSTN1O94985 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLSTN1O94985 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CLSTN1O94985 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLSTN1O94985 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.04■□□□□ 0.32
CLSTN1O94985 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.04■□□□□ 0.32
CLSTN1O94985 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.04■□□□□ 0.32
CLSTN1O94985 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CLSTN1O94985 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.04■□□□□ 0.32
CLSTN1O94985 SDHAP3-202ENST00000515467 728 ntBASIC17.04■□□□□ 0.32
CLSTN1O94985 TIMM17BP1-201ENST00000545713 516 ntBASIC17.04■□□□□ 0.32
CLSTN1O94985 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.04■□□□□ 0.32
CLSTN1O94985 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.04■□□□□ 0.32
CLSTN1O94985 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLSTN1O94985 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.04■□□□□ 0.32
CLSTN1O94985 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLSTN1O94985 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.04■□□□□ 0.32
CLSTN1O94985 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.04■□□□□ 0.32
CLSTN1O94985 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLSTN1O94985 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.04■□□□□ 0.32
CLSTN1O94985 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLSTN1O94985 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLSTN1O94985 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.03■□□□□ 0.32
CLSTN1O94985 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC17.03■□□□□ 0.32
CLSTN1O94985 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLSTN1O94985 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CLSTN1O94985 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.03■□□□□ 0.32
CLSTN1O94985 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 FAM8A3P-201ENST00000427218 844 ntBASIC17.03■□□□□ 0.32
CLSTN1O94985 EEF1DP4-201ENST00000446006 880 ntBASIC17.03■□□□□ 0.32
CLSTN1O94985 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.03■□□□□ 0.32
CLSTN1O94985 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.03■□□□□ 0.32
CLSTN1O94985 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.03■□□□□ 0.32
CLSTN1O94985 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.03■□□□□ 0.32
CLSTN1O94985 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.03■□□□□ 0.32
CLSTN1O94985 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.03■□□□□ 0.32
CLSTN1O94985 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 AL844908.2-201ENST00000609461 460 ntBASIC17.03■□□□□ 0.32
CLSTN1O94985 AC074044.1-201ENST00000609673 707 ntBASIC17.03■□□□□ 0.32
CLSTN1O94985 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.03■□□□□ 0.32
CLSTN1O94985 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLSTN1O94985 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms