Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCL13O43927 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCL13O43927 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCL13O43927 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CXCL13O43927 GK-202ENST00000378941 458 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCL13O43927 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCL13O43927 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CXCL13O43927 AC234783.1-201ENST00000441761 496 ntBASIC13.69□□□□□ -0.22
CXCL13O43927 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCL13O43927 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.69□□□□□ -0.22
CXCL13O43927 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCL13O43927 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL13O43927 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL13O43927 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCL13O43927 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL13O43927 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.69□□□□□ -0.22
CXCL13O43927 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCL13O43927 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL13O43927 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CXCL13O43927 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CXCL13O43927 PRSS30P-206ENST00000641773 873 ntBASIC13.69□□□□□ -0.22
CXCL13O43927 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL13O43927 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CXCL13O43927 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCL13O43927 AL109954.1-202ENST00000564051 2148 ntBASIC13.69□□□□□ -0.22
CXCL13O43927 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL13O43927 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CXCL13O43927 REXO1L5P-201ENST00000622260 2098 ntBASIC13.68□□□□□ -0.22
CXCL13O43927 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL13O43927 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CXCL13O43927 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CXCL13O43927 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 OR8S1-201ENST00000310194 1080 ntBASIC13.68□□□□□ -0.22
CXCL13O43927 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 AC079776.1-201ENST00000401540 1152 ntBASIC13.68□□□□□ -0.22
CXCL13O43927 ACTBP8-201ENST00000403258 1108 ntBASIC13.68□□□□□ -0.22
CXCL13O43927 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.68□□□□□ -0.22
CXCL13O43927 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL13O43927 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL13O43927 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.68□□□□□ -0.22
CXCL13O43927 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCL13O43927 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CXCL13O43927 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CXCL13O43927 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.68□□□□□ -0.22
CXCL13O43927 AL512343.1-201ENST00000605837 169 ntBASIC13.68□□□□□ -0.22
CXCL13O43927 AC145423.3-201ENST00000615987 467 ntBASIC13.68□□□□□ -0.22
CXCL13O43927 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CXCL13O43927 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CXCL13O43927 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CXCL13O43927 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CXCL13O43927 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 AL157414.3-201ENST00000624276 1954 ntBASIC13.68□□□□□ -0.22
CXCL13O43927 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CXCL13O43927 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCL13O43927 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL13O43927 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL13O43927 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCL13O43927 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CXCL13O43927 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CXCL13O43927 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL13O43927 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CXCL13O43927 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms