Protein–RNA interactions for Protein: O43653

PSCA, Prostate stem cell antigen, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSCAO43653 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PSCAO43653 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.48□□□□□ -0.73
PSCAO43653 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC10.48□□□□□ -0.73
PSCAO43653 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PSCAO43653 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PSCAO43653 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PSCAO43653 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PSCAO43653 AL607033.1-201ENST00000623900 1599 ntBASIC10.48□□□□□ -0.73
PSCAO43653 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PSCAO43653 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
PSCAO43653 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 AC069224.1-201ENST00000566372 1715 ntBASIC10.47□□□□□ -0.73
PSCAO43653 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 AL513523.2-202ENST00000427283 2040 ntBASIC10.47□□□□□ -0.73
PSCAO43653 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 COPE-202ENST00000349893 948 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 GRAP-202ENST00000395635 834 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC10.47□□□□□ -0.73
PSCAO43653 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 AP005018.1-201ENST00000525475 301 ntBASIC10.47□□□□□ -0.73
PSCAO43653 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 API5-211ENST00000534695 560 ntTSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
PSCAO43653 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC10.47□□□□□ -0.73
PSCAO43653 AL596325.1-201ENST00000563991 1082 ntBASIC10.47□□□□□ -0.73
PSCAO43653 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.47□□□□□ -0.73
PSCAO43653 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC10.47□□□□□ -0.73
PSCAO43653 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 TCAF2P1-201ENST00000291129 2421 ntBASIC10.47□□□□□ -0.73
PSCAO43653 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC10.47□□□□□ -0.73
PSCAO43653 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
PSCAO43653 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC10.47□□□□□ -0.73
PSCAO43653 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PSCAO43653 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC10.46□□□□□ -0.73
PSCAO43653 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC10.46□□□□□ -0.73
PSCAO43653 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.46□□□□□ -0.73
PSCAO43653 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.46□□□□□ -0.73
PSCAO43653 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC10.46□□□□□ -0.73
PSCAO43653 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC10.46□□□□□ -0.73
PSCAO43653 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
PSCAO43653 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PSCAO43653 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.46□□□□□ -0.73
PSCAO43653 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms