Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDH17O14917 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH17O14917 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH17O14917 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH17O14917 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 KRT8P44-201ENST00000441609 1350 ntBASIC14.66□□□□□ -0.06
PCDH17O14917 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH17O14917 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 SOCS2P1-201ENST00000417727 557 ntBASIC14.66□□□□□ -0.06
PCDH17O14917 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDH17O14917 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.66□□□□□ -0.06
PCDH17O14917 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.66□□□□□ -0.06
PCDH17O14917 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH17O14917 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH17O14917 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDH17O14917 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDH17O14917 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 HILS1-202ENST00000545329 423 ntBASIC14.66□□□□□ -0.06
PCDH17O14917 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH17O14917 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDH17O14917 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH17O14917 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH17O14917 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH17O14917 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH17O14917 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH17O14917 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
PCDH17O14917 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH17O14917 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
PCDH17O14917 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 KRT8P22-201ENST00000562317 1415 ntBASIC14.66□□□□□ -0.06
PCDH17O14917 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH17O14917 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PCDH17O14917 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 AC098850.1-201ENST00000419919 790 ntBASIC14.65□□□□□ -0.06
PCDH17O14917 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDH17O14917 TTTY23B-201ENST00000442790 549 ntBASIC14.65□□□□□ -0.06
PCDH17O14917 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDH17O14917 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDH17O14917 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.65□□□□□ -0.06
PCDH17O14917 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
PCDH17O14917 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 AC015910.1-201ENST00000579400 975 ntBASIC14.65□□□□□ -0.06
PCDH17O14917 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.65□□□□□ -0.06
PCDH17O14917 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 AL121723.1-201ENST00000445194 1519 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms